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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PADI4, peptidyl arginine deiminase, type IV
Sequence ID:NM_012387
RefSeqGene ID:NG_023261
Entrez Gene ID:23569
Ensembl ID:ENSG00000159339

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RHEUMATOID ARTHRITISCD244
CIITA
HLA-DRB1
HLA-DRB1
HLA-DRB1
IL10
NFKBIL1
PTPN22
RUNX1
RUNX1
SLC22A4
STAT4
STAT4

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 17634691 - 17690495

 Exon Info From UCSC:
NM_012387

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5228777Full LengthBC025718peptidyl arginine deiminase, type IV

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036519  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_012387 NP_036519 Q9UM07 EC 3.5.3.15 PAD
PAD_N
PAD_M

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF229067 AAF82265 Q9NRE8  
BC025718 AAH25718 Q9UM07 EC 3.5.3.15
JF432820 ADZ16037    
AB017919 BAA84542 Q9UM07 EC 3.5.3.15
AK290507 BAF83196 A8K392  
AK314839 BAG37357 B2RBW0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PADI4 NP_036519 R.norvegicus Padi4 29512   NP_058923 75
M.musculus Padi4 18602 Gene Info NP_035191 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)