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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EMD, emerin
Sequence ID:NM_000117
RefSeqGene ID:NG_008677
Entrez Gene ID:2010
Ensembl ID:ENSG00000102119

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EMERY-DREIFUSS MUSCULAR DYSTROPHY 1, X-LINKED 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 153607722 - 153609883

NM_000117 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1330153607596153607925
331435153608049153608153
436513153608301153608378
514647153608593153608726
648697153609112153609161
6981337153609241153609880

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3505626Full LengthBC000738emerin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000108  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000117 NP_000108 P50402 LEM

Related Sequences

 
mRNAGenPeptSwissProt
BC000738 AAH00738 P50402
BT007401 AAP36065 P50402
X82434 CAA57817 P50402
CR536536 CAG38773 P50402
AM393723 CAL38599  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EMD NP_000108 M.musculus Emd 13726 Gene Info NP_031953 76
R.norvegicus Emd 25437   NP_037080 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)