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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSMD10, proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
Sequence ID:NM_002814
NM_170750
RefSeqGene ID:NG_012521
Entrez Gene ID:5716
Ensembl ID:ENSG00000101843

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 107327438 - 107334772

 Exon Info From UCSC:
NM_002814
NM_170750

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3881328Full LengthBC011960proteasome (prosome, macropain) 26S subunit, non-ATPase, 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_736606  NP_002805  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002814 NP_002805 O75832 Ank
NM_170750 NP_736606   Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC011960 AAH11960 O75832
AY057056 AAL25260 O75832
BT019689 AAV38495 Q5U0B2
GQ129344 ACT64478  
GQ129345 ACT64479  
AB009619 BAA33215 O75832
D83197 BAA34594 O75832
AK295996 BAG58771 O75832

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMD10 NP_002805 M.musculus Psmd10 53380 Gene Info NP_058579 94
N.crassa NCU02967 3881517   XP_965354 40
A.gambiae AgaP_AGAP000809 1272398   XP_311348 39
S.cerevisiae NAS6 853147   NP_011748 37
S.pombe SPAC6C3.08 2542919   NP_593722 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)