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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLDN2, claudin 2
Sequence ID:NM_001171092
NM_001171095
NM_020384
RefSeqGene ID:NG_016445
Entrez Gene ID:9075
Ensembl ID:ENSG00000165376

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22.3-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 106143393 - 106172805

 Exon Info From UCSC:
NM_001171092
NM_001171095
NM_020384

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4645075Full LengthBC014424claudin 2
30322852Full LengthBC071747claudin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065117  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171092 NP_001164563    
NM_001171095 NP_001164566    
NM_020384 NP_065117 P57739 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
AF250558 AAF98151 P57739
AF177340 AAG17984 P57739
BC014424 AAH14424 P57739
BC071747 AAH71747 P57739
AY358474 AAQ88838 P57739
DQ892216 ABM83142  
DQ895412 ABM86338  
AK075371 BAC11575 P57739
AK312515 BAG35416 P57739
AK075405 BAG52130 P57739

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLDN2 NP_001164563 R.norvegicus Cldn2 300920   NP_001100316 92
M.musculus Cldn2 12738 Gene Info NP_057884 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)