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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AKAP17A, A kinase (PRKA) anchor protein 17A
Sequence ID:NM_005088
NR_027383
RefSeqGene ID:NG_021470
Entrez Gene ID:8227
Ensembl ID:ENSG00000197976

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.33 and Yp11.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 1710490 - 1718637

NM_005088 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117717104851710661
17895817123361713116
959110717142761714424
1108134817180841718324
1349320617195511721408

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5217247Full LengthBC028151splicing factor, arginine/serine-rich 17A
40007662Full LengthBC110496splicing factor, arginine/serine-rich 17A
40007663Full LengthBC110497splicing factor, arginine/serine-rich 17A
4430810IncompleteBC016935splicing factor, arginine/serine-rich 17A

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001171038 NP_001164509      
NM_001171039 NP_001164510      
NM_004043 NP_004034      
NM_005088 NP_005079 Q02040    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M83779 AAA17020 P46597 EC 2.1.1.4
M99578 AAA36187 Q02040  
U11090 AAA58582 P46597 EC 2.1.1.4
U11091 AAA58583 P46597 EC 2.1.1.4
L03426 AAA61303 Q02040  
L03426 AAA61304 Q02040  
BC001620 AAH01620 P46597 EC 2.1.1.4
BC016935 AAH16935 Q05DA9  
BC028151 AAH28151 Q02040  
BC110496 AAI10497 Q02040  
BC110497 AAI10498 Q02040  
AK314922 BAG37430 P46597 EC 2.1.1.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AKAP17A NP_005079 C.elegans cux-7 176066   NP_498651 43
A.gambiae AgaP_AGAP003276 1269178   XP_307783 41
D.melanogaster Xe7 40699   NP_730984 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)