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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. FBXW5, F-box and WD repeat domain containing 5
Sequence ID:NM_018998
NM_178225
NM_178226
RefSeqGene ID:NG_029580
Entrez Gene ID:54461
Ensembl ID:ENSG00000159069

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 139834887 - 139837342

Transcript StartTranscript EndChromosomal Start Chromosomal End
44779139834887139835622
780992139835702139835914
9931140139835988139836135
11411561139836497139836917
15621710139836998139837146
17111885139837220139837394
18862043139837800139837957
20442259139838342139838557
22602387139839045139839172

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3958395Full LengthBC014297F-box and WD repeat domain containing 5
4620371Full LengthBC014130F-box and WD repeat domain containing 5
2988331IncompleteBC009429F-box and WD repeat domain containing 5
3951723IncompleteBC004541F-box and WD repeat domain containing 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061871  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018998 NP_061871 Q969U6 WD40
F-box

Related Sequences

 
mRNAGenPeptSwissProt
AF217998 AAG17240 Q969U6
AF258569 AAG23772 Q969U6
BC000850 AAH00850 Q969U6
BC004541 AAH04541 Q969U6
BC009429 AAH09429 Q969U6
BC014130 AAH14130 Q969U6
BC014297 AAH14297 Q969U6
JF432249 ADZ15466  
AK026081 BAB15354 Q969U6
AB209726 BAD92963 Q969U6
AK315738 BAG38093 Q969U6
AL137631 CAB70851 Q969U6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FBXW5 NP_061871 M.musculus Fbxw5 30839 Gene Info NP_038936 90
R.norvegicus Fbxw5 362081   NP_001020901 90
A.gambiae AgaP_AGAP010041 1279466   XP_319186 50
D.melanogaster Fbw5 33854   NP_608989 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)