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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. POMT1, protein-O-mannosyltransferase 1
Sequence ID:NM_001077365
NM_001077366
NM_001136113
NM_001136114
NM_007171
RefSeqGene ID:NG_008896
Entrez Gene ID:10585
Ensembl ID:ENSG00000130714

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYEANOMALIES), TYPE A, 1FKRP
FKTN
LARGE
POMT2
MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH MENTAL RETARDATION), TYPE B, 1 
MUSCULARDYSTROPHY-DYSTROGLYCANOPATHY (LIMB-GIRDLE), TYPE C, 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 134380384 - 134399185

 Exon Info From UCSC:
NM_001077365
NM_001077366
NM_001136113
NM_001136114
NM_007171

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4826806Full LengthBC022877protein-O-mannosyltransferase 1
6155142Full LengthBC065268protein-O-mannosyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009102  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077365 NP_001070833    
NM_001077366 NP_001070834    
NM_001136113 NP_001129585    
NM_001136114 NP_001129586    
NM_007171 NP_009102   PMT
MIR

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF095136 AAD41245 Q9Y6A1 EC 2.4.1.109
BC022877 AAH22877 Q9Y6A1 EC 2.4.1.109
BC065268 AAH65268 Q9Y6A1 EC 2.4.1.109
AK000475 BAA91190 Q9Y6A1 EC 2.4.1.109
AK074888 BAC11269 Q9Y6A1 EC 2.4.1.109
AB209430 BAD92667 Q59FN0  
AK074874 BAG52022 Q9Y6A1 EC 2.4.1.109
AK293529 BAG57011 B4DEA0  
AK295458 BAG58392 B4DI80  
AK295561 BAG58462 Q9Y6A1 EC 2.4.1.109
AK299646 BAG61567 B4DSA5  
AK300393 BAG62126 B4DTW4  
AK300511 BAG62223 B4DU61  
AK301486 BAG63000 B4DWD8  
AK303254 BAG64337 B4E075  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POMT1 NP_009102 M.musculus Pomt1 99011 Gene Info NP_660127 86
R.norvegicus Pomt1 84430   NP_445858 86
A.gambiae AgaP_AGAP010784 1278880   XP_318526 44
D.melanogaster rt 39297   NP_524025 44
N.crassa NCU09332 3880075   XP_963926 36
S.pombe ogm4 2539761   NP_596807 34
S.cerevisiae PMT4 853608   NP_012677 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)