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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C9orf16, chromosome 9 open reading frame 16
Sequence ID:NM_024112
Entrez Gene ID:79095
Ensembl ID:ENSG00000171159

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 130923368 - 130926202

NM_024112 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1227130922538130922764
228713130925721130926206

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3027807Full LengthBC008887chromosome 9 open reading frame 16
3529116Full LengthBC001857chromosome 9 open reading frame 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077017  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024112 NP_077017 Q9BUW7 UPF0184

Related Sequences

 
mRNAGenPeptSwissProt
BC001857 AAH01857 Q9BUW7
BC008887 AAH08887 Q9BUW7
AK315753 BAG38107 Q9BUW7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C9orf16 NP_077017 M.musculus 1110008P14Rik 73737 Gene Info NP_932118 94
R.norvegicus RGD1561113 499780   XP_575113 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)