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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FBXO42, F-box protein 42
Sequence ID:NM_018994
Entrez Gene ID:54455
Ensembl ID:ENSG00000037637

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.23-p36.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 16573333 - 16641716

NM_018994 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3717571657655916578279
175818741657878216578898
187519311657959016579646
193220281658012916580225
202921391658220516582315
214022931658310016583253
229424281662127716621411
242925451663229716632413
254628121664166316641929
281330111667874916678947

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6155685Full LengthBC043410F-box protein 42
6182628Full LengthBC063864F-box protein 42
4053618IncompleteBC006174F-box protein 42
5164686IncompleteBC032439F-box protein 42

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061867  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018994 NP_061867 Q6P3S6 F-box
Kelch_1
Kelch_2

Related Sequences

 
mRNAGenPeptSwissProt
BC006174 AAH06174 Q6P3S6
BC032439 AAH32439 Q6P3S6
BC043410 AAH43410 Q6P3S6
BC063864 AAH63864 Q6P3S6
AB037753 BAA92570 Q6P3S6
AK055598 BAG51542 Q6P3S6
AL833874 CAD38731 Q6P3S6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FBXO42 NP_061867 R.norvegicus Fbxo42 362646   NP_001102161 98
M.musculus Fbxo42 213499 Gene Info NP_766106 95
D.melanogaster CG6758 37532   NP_611647 43
A.gambiae AgaP_AGAP012367 1280344   XP_320189 40