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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. HNRNPK, heterogeneous nuclear ribonucleoprotein K
Sequence ID:NM_002140
NM_031262
NM_031263
RefSeqGene ID:NG_029577
Entrez Gene ID:3190
Ensembl ID:ENSG00000165119

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q21.32-q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 86583093 - 86595117

 Exon Info From UCSC:
NM_002140
NM_031262
NM_031263

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964383Full LengthBC000355heterogeneous nuclear ribonucleoprotein K
4906241Full LengthBC014980heterogeneous nuclear ribonucleoprotein K

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002131  NP_112553  NP_112552  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002140 NP_002131 Q6IBN1 KH_1
ROKNT
NM_031262 NP_112552 P61978 KH_1
ROKNT
NM_031263 NP_112553 Q6IBN1 KH_1
ROKNT

Related Sequences

 
mRNAGenPeptSwissProt
S74678 AAB20770 P61978
BC000355 AAH00355 P61978
Q6IBN1
BC014980 AAH14980 P61978
AY911506 AAW84289 Q5EC54
DQ890727 ABM81653  
DQ893902 ABM84828  
AB209562 BAD92799 P61978
AK291336 BAF84025 Q6IBN1
AK096385 BAG53278 B3KU16
AK123117 BAG53872 B3KU16
AK294067 BAG57412 B4DFF1
AK300744 BAG62413 B4DUQ1
AB451263 BAG70077 Q6IBN1
AB451390 BAG70204 Q6IBN1
X72727 CAA51267 P61978
CR456771 CAG33052 Q6IBN1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HNRNPK NP_002131 M.musculus Hnrnpk 15387 Gene Info NP_079555 100
R.norvegicus Hnrnpk 117282   NP_476482 100
C.elegans F26B1.2 172330   NP_740869 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)