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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. COBRA1, cofactor of BRCA1
Sequence ID:NM_015456
Entrez Gene ID:25920
Ensembl ID:ENSG00000188986

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 140161408 - 140167991

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3941719Full LengthBC011892cofactor of BRCA1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056271  

Protein Infomation

NM_015456 NP_056271 Q8WX92 COBRA1

Related Sequences

BC011892 AAH11892 Q8WX92
AF464935 AAL69965 Q8WX92
AB033008 BAA86496 Q8WX92
AK022651 BAB14157 Q8WX92
AK091056 BAG52272 Q8WX92
AL050280 CAB43381 Q8WX92
AM393289 CAL38167 Q8WX92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens COBRA1 NP_056271 R.norvegicus Cobra1 311796   NP_001101287 97
M.musculus Cobra1 58202 Gene Info NP_067368 96
A.gambiae AgaP_AGAP012109 1280567   XP_320419 55
D.melanogaster NELF-B 31681   NP_572402 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)