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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC12A9, solute carrier family 12 (potassium/chloride transporters), member 9
Sequence ID:NM_001267812
NM_001267814
NM_020246
Entrez Gene ID:56996
Ensembl ID:ENSG00000146828

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 100450412 - 100464632


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900382Full LengthBC000154solute carrier family 12 (potassium/chloride transporters), member 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064631  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001267812 NP_001254741    
NM_001267814 NP_001254743    
NM_020246 NP_064631 Q9BXP2 AA_permease

Related Sequences

 
mRNAGenPeptSwissProt
AF284422 AAF88060 Q9BXP2
BC000154 AAH00154 Q9BXP2
AK024420 BAB15710 Q9H7Q8
AK024421 BAB15711 Q9H7Q7
AK024466 BAB15756 Q9H7L3
AK024494 BAB15784 Q9H7I6
AB033284 BAB40456 Q9BXP2
AK090458 BAC03439 Q8NF23
AK301411 BAH13476 B7Z740

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC12A9 NP_064631 M.musculus Slc12a9 83704 Gene Info NP_113583 94
A.gambiae AgaP_AGAP010249 1279673   XP_319440 47
D.melanogaster CG10413 35111   NP_609887 46
C.elegans T04B8.5 173453   NP_001022305 43
N.crassa NCU03784 3877264   XP_961130 37
S.cerevisiae YBR235W 852537   NP_009794 36
S.pombe can1 2540830   NP_595740 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)