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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CD164, CD164 molecule, sialomucin
Sequence ID:NM_001142401
NM_001142402
NM_001142403
NM_001142404
NM_006016
Entrez Gene ID:8763
Ensembl ID:ENSG00000135535

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 109690053 - 109703581

 Exon Info From UCSC:
NM_001142401
NM_001142402
NM_001142403
NM_001142404
NM_006016

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3854912Full LengthBC011522CD164 molecule, sialomucin
4838910IncompleteBC040317CD164 molecule, sialomucin
5277669IncompleteBC037914CD164 molecule, sialomucin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006007  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142401 NP_001135873    
NM_001142402 NP_001135874    
NM_001142403 NP_001135875    
NM_001142404 NP_001135876    
NM_006016 NP_006007 Q04900 MGC-24

Related Sequences

 
mRNAGenPeptSwissProt
AF106518 AAC82473 Q04900
AF263279 AAF85965 Q04900
AF299341 AAG53906 Q04900
AF299342 AAG53907 Q04900
AF299343 AAG53908 Q04900
BC011522 AAH11522 Q04900
DQ891034 ABM81960  
DQ894213 ABM85139  
D14043 BAA03130 Q04900
AK312357 BAG35275 Q04900
AK298684 BAG60847 Q04900
AK301692 BAG63164 B4DWV2
AK303525 BAG64553 Q04900
AK315908 BAH14279 Q04900

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CD164 NP_006007 M.musculus Cd164 53599 Gene Info NP_058594 69
R.norvegicus Cd164 83689   NP_114000 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)