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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ELOVL5, ELOVL fatty acid elongase 5
Sequence ID:NM_001242828
NM_001242830
NM_001242831
NM_021814
Entrez Gene ID:60481
Ensembl ID:ENSG00000012660

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1-p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 53132202 - 53213725

Transcript StartTranscript EndChromosomal Start Chromosomal End
3919115313219553134067
191220465313539053135524
204721715313801753138141
217223435313988753140058
234424215314097653141053
242226095315657353156760
261026755316043953160504
267630035321361453213941

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6160926Full LengthBC067123ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
3944293IncompleteBC009838ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
4635513IncompleteBC017270ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068586  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001242828 NP_001229757      
NM_001242830 NP_001229759      
NM_001242831 NP_001229760      
NM_021814 NP_068586 Q9NYP7 EC 2.3.1.199 ELO

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF111849 AAF16688 Q9NYP7 EC 2.3.1.199
AF231981 AAF70631 Q9NYP7 EC 2.3.1.199
BC017270 AAH17270 Q9NYP7 EC 2.3.1.199
BC067123 AAH67123 Q9NYP7 EC 2.3.1.199
AF338241 AAM00193 Q9NYP7 EC 2.3.1.199
HQ447433 ADQ31919    
AK074748 BAC11178 Q9NYP7 EC 2.3.1.199
AK074889 BAC11270 Q9NYP7 EC 2.3.1.199
AB209798 BAD93035 Q9NYP7 EC 2.3.1.199
AK125098 BAG54141 B3KWH9  
AK299674 BAG61584 B4DSC2  
AK302948 BAG64104 B4DZJ2  
AL136939 CAB66873 Q9NYP7 EC 2.3.1.199

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ELOVL5 NP_001229757 M.musculus Elovl5 68801 Gene Info NP_599016 93
R.norvegicus Elovl5 171400   NP_599209 93
N.crassa NCU06694 3877156   XP_961009 36
S.pombe SPAC1B2.03c 2542505   NP_593930 31
S.cerevisiae FEN1 850400   NP_009963 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)