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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL7L1, ribosomal protein L7-like 1
Sequence ID:NM_198486
Entrez Gene ID:285855
Ensembl ID:ENSG00000146223

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 42847666 - 42857179

NM_198486 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1194284767042847688
201254284859842848703
1262894285118842851351
2904274285235042852487
4285374285371142853820
53812754285399342854730

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5491531Full LengthBC073890ribosomal protein L7-like 1
6736635Full LengthBC058020ribosomal protein L7-like 1
5574226IncompleteBC064519ribosomal protein L7-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_940888  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198486 NP_940888 Q6DKI1 Ribosomal_L30

Related Sequences

 
mRNAGenPeptSwissProt
BC058020 AAH58020 Q6DKI1
BC073890 AAH73890 Q6DKI1
EU832540 ACE86942  
EU832458 ACE87630  
HQ447443 ADQ31929  
AK291310 BAF83999 A8K5J5
AK291949 BAF84638 Q6DKI1
AK021904 BAG51057 B3KMP5
AK299816 BAH13138 B7Z652

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL7L1 NP_940888 R.norvegicus Rpl7l1 317275   XP_228615 86
M.musculus Rpl7l1 66229 Gene Info NP_079709 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)