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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TAF8, TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
Sequence ID:NM_138572
Entrez Gene ID:129685
Ensembl ID:ENSG00000137413

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 42046079 - 42047735

NM_138572 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1744201825042018323
752314201909442019250
2323304202326842023366
3313934202368942023751
3945184202512642025250
5196664203404942034196
6678094203620242036344
8109494204483742044976
95043224204527042048642

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40116287Full LengthBC119678TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
40116290Full LengthBC119679TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612639  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138572 NP_612639 Q7Z7C8 Bromo_TP

Related Sequences

 
mRNAGenPeptSwissProt
BC119678 AAI19679 Q7Z7C8
BC119679 AAI19680 Q7Z7C8
AF465841 AAP47094 Q7Z7C8
AK057383 BAB71460 Q7Z7C8
AK303097 BAG64207 B4DZU5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF8 NP_612639 R.norvegicus Taf8 316216   NP_001101667 96
M.musculus Taf8 63856 Gene Info NP_071298 95
A.gambiae AgaP_AGAP012105 1280571   XP_320424 54
D.melanogaster Taf8 32792   NP_523397 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)