Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PACSIN1, protein kinase C and casein kinase substrate in neurons 1
Sequence ID:NM_001199583
NM_020804
Entrez Gene ID:29993
Ensembl ID:ENSG00000124507

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 34433880 - 34502956

Transcript StartTranscript EndChromosomal Start Chromosomal End
11433443390434434046
1442693449401934494144
2704263449510834495264
4276623449641834496653
6638183449717334497328
8199943449744234497617
99511153449801934498139
111612433449823634498363
124414313449937634499563
143242323450019734502997

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5173129Full LengthBC040228protein kinase C and casein kinase substrate in neurons 1
40114535IncompleteBC128219protein kinase C and casein kinase substrate in neurons 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065855  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199583 NP_001186512    
NM_020804 NP_065855 Q9BY11
Q5TZC3
SH3_1
FCH

Related Sequences

 
mRNAGenPeptSwissProt
BC040228 AAH40228 Q9BY11
Q5TZC3
BC128219 AAI28220 A2VCM5
AF242529 AAK29206 Q9BY11
Q5TZC3
DQ892478 ABM83404  
DQ895689 ABM86615  
AB037800 BAA92617 Q9BY11
AK289956 BAF82645 Q5TZC3
AK294132 BAG57460 B4DFJ9
AL834211 CAD38895 Q9BY11
Q5TZC3
AM393510 CAL38387  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PACSIN1 NP_001186512 M.musculus Pacsin1 23969 Gene Info NP_848142 96
R.norvegicus Pacsin1 29704   NP_058990 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)