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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
Sequence ID:NM_001114617
NM_001114618
NM_001114619
NM_001114620
NM_002406
RefSeqGene ID:NG_032928
Entrez Gene ID:4245
Ensembl ID:ENSG00000131446

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 180218555 - 180220056

 Exon Info From UCSC:
NM_001114617
NM_001114618
NM_001114619
NM_001114620
NM_002406

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3544942Full LengthBC003575mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002397  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001114617 NP_001108089      
NM_001114618 NP_001108090      
NM_001114619 NP_001108091      
NM_001114620 NP_001108092      
NM_002406 NP_002397 P26572 EC 2.4.1.101 GNT-I

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M55621 AAA52563 P26572 EC 2.4.1.101
BC003575 AAH03575 P26572 EC 2.4.1.101
AF289558 AAL55742 Q8WZ34  
DQ892503 ABM83429    
DQ895716 ABM86642    
AK075429 BAC11616 Q8NBL8  
AB209239 BAD92476 Q59G70  
AK290769 BAF83458 P26572 EC 2.4.1.101
AK057194 BAG51880 B3KQ18  
AK090523 BAG52177 B3KQW5  
AK092256 BAG52510 B3KRU8  
AK094130 BAG52821 P26572 EC 2.4.1.101
CR456861 CAG33142 P26572 EC 2.4.1.101

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MGAT1 NP_002397 R.norvegicus Mgat1 81519   NP_110488 91
M.musculus Mgat1 17308 Gene Info NP_001103618 90
A.gambiae AgaP_AGAP005347 1276054   XP_315359 57
D.melanogaster Mgat1 37323   NP_525117 57
C.elegans gly-14 175453   NP_497719 47
C.elegans gly-13 181160   NP_509566 46
A.thaliana CGL1 829981   NP_849517 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)