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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. IRGM, immunity-related GTPase family, M
Sequence ID:NM_001145805
RefSeqGene ID:NG_027809
Entrez Gene ID:345611
Ensembl ID:ENSG00000237693

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MYCOBACTERIUM TUBERCULOSISCCL2
CD209
CISH
CTSZ
IFNG
IFNGR1
MC3R
SLC11A1
SP110
TIRAP

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q33.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 150228058 - 150280297

NM_001145805 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1698150226084150226781
6991657150227270150228228

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40113046Full LengthBC128167immunity-related GTPase family, M
40113047Full LengthBC128168immunity-related GTPase family, M
5183529IncompleteBC038539immunity-related GTPase family, M

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145805 NP_001139277 A1A4Y4  

Related Sequences

 
mRNAGenPeptSwissProt
BC128167 AAI28168 A1A4Y4
BC128168 AAI28169 A1A4Y4
EU742619 ACF21844 A1A4Y4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IRGM NP_001139277 R.norvegicus Irgm 303090   NP_001012007 59
M.musculus Irgm1 15944 Gene Info NP_032352 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)