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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HDAC3, Histone deacetylase 3
Sequence ID:NM_003883
RefSeqGene ID:NG_029678
Entrez Gene ID:8841
Ensembl ID:ENSG00000171720

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 141000442 - 141014729

 Exon Info From UCSC:
NM_003883

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3345755Full LengthBC000614histone deacetylase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003874  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003883 NP_003874 O15379 EC 3.5.1.98 Hist_deacetyl

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF005482 AAB87752 O15379 EC 3.5.1.98
U75696 AAB88240 O15379 EC 3.5.1.98
U75697 AAB88241 O15379 EC 3.5.1.98
U66914 AAC52038 O15379 EC 3.5.1.98
AF039703 AAC98927 O15379 EC 3.5.1.98
BC000614 AAH00614 O15379 EC 3.5.1.98
DQ891916 ABM82842    
DQ895101 ABM86027    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HDAC3 NP_003874 M.musculus Hdac3 15183 Gene Info NP_034541 100
R.norvegicus Hdac3 84578   NP_445900 100
D.melanogaster Hdac3 44446   NP_651978 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta