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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXD1, Forkhead box D1
Sequence ID:NM_004472
Entrez Gene ID:2297
Ensembl ID:ENSG00000251493

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q12-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 72743512 - 72743830

NM_004472 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
512177274208672743298
122022727274329972744351

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063962Full LengthBC160026forkhead box D1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004463  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004472 NP_004463 Q16676 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
U13222 AAA92039 Q16676
U59832 AAC50661 Q16676
BC160026 AAI60026  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXD1 NP_004463 M.musculus Foxd1 15229 Gene Info NP_032268 85
R.norvegicus Foxd1 171299   XP_001057782 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)