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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNTN2, contactin 2 (axonal)
Sequence ID:NM_005076
Entrez Gene ID:6900
Ensembl ID:ENSG00000184144

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 205045521 - 205047138

 Exon Info From UCSC:
NM_005076

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40128240Full LengthBC129986contactin 2 (axonal)
5260222IncompleteBC036477contactin 2 (axonal)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005067  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005076 NP_005067 Q02246 fn3
ig
I-set

Related Sequences

 
mRNAGenPeptSwissProt
BC129986 AAI29987 A1L3A3
AK289985 BAF82674 A8K1S0
AK124736 BAG54084 B3KWC2
X67734 CAA47963 Q02246
X68274 CAA48335 Q02246
CR749495 CAH18318 Q68DA2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNTN2 NP_005067 M.musculus Cntn2 21367 Gene Info NP_796103 91
R.norvegicus Cntn2 25356   NP_037016 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)