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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FMOD, fibromodulin
Sequence ID:NM_002023
Entrez Gene ID:2331
Ensembl ID:ENSG00000122176

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 203309752 - 203320227

NM_002023 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
211890203309752203311621
18912876203316419203317404
28773005203320160203320288

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5181410Full LengthBC035281fibromodulin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002014  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002023 NP_002014 Q06828 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
U05291 AAA16153 Q12833
BC035281 AAH35281 Q06828
DQ892112 ABM83038  
DQ895306 ABM86232  
AK291632 BAF84321 Q06828
AK092899 BAG52626 B3KS64
AK303866 BAG64805 B4E1J3
X75546 CAA53233 Q06828

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FMOD NP_002014 M.musculus Fmod 14264 Gene Info NP_067330 93
R.norvegicus Fmod 64507   NP_542429 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta