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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NPNT, nephronectin
Sequence ID:NM_198278
NM_001033047
NM_001184690
NM_001184691
NM_001184692
NM_001184693
Entrez Gene ID:255743
Ensembl ID:ENSG00000168743

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 106890500 - 106892828

 Exon Info From UCSC:
NM_001033047
NM_001184690
NM_001184691
NM_001184692
NM_001184693

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066380Full LengthBC166654nephronectin
40113283IncompleteBC131587nephronectin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033047 NP_001028219 Q6UXI9  
NM_001184690 NP_001171619    
NM_001184691 NP_001171620    
NM_001184692 NP_001171621    
NM_001184693 NP_001171622    

Related Sequences

 
mRNAGenPeptSwissProt
BC166654 AAI66654 Q6UXI9
AY358336 AAQ88702 Q6UXI9
AK290029 BAF82718 Q6UXI9
AK295772 BAG58596 B4DIT4
AK302477 BAG63765 B4DYK3
AK304279 BAG65139 B4E2H7
AK304721 BAG65484 B4E3H2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NPNT NP_001171620 M.musculus Npnt 114249 Gene Info NP_277060 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)