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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IBSP, Integrin-binding sialoprotein
Sequence ID:NM_004967
Entrez Gene ID:3381
Ensembl ID:ENSG00000029559

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88720741 - 88733074

NM_004967 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1848872070188720784
851528872349988723566
1532038872365988723709
2042818872380588723882
2823448872727388727335
3455038873175788731915
50415898873251388733598

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40080749BC111920integrin-binding sialoprotein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004958  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004967 NP_004958 P21815 BSP_II

Related Sequences

 
mRNAGenPeptSwissProt
J05213 AAC95490 P21815
BC111920 AAI11921 P21815

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IBSP NP_004958 M.musculus Ibsp 15891 Gene Info NP_032344 73
R.norvegicus Ibsp 24477   NP_036719 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta