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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ARPC5, actin related protein 2/3 complex, subunit 5, 16kDa
Sequence ID:NM_001270439
NM_005717
Entrez Gene ID:10092
Ensembl ID:ENSG00000162704

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 183595331 - 183604818

Transcript StartTranscript EndChromosomal Start Chromosomal End
201416183595332183596728
14171593183599595183599771
15941666183602216183602288
16672000183604651183604984

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3931697Full LengthBC057237actin related protein 2/3 complex, subunit 5, 16kDa
5922521Full LengthBC071857actin related protein 2/3 complex, subunit 5, 16kDa
100015994BC152789actin related protein 2/3 complex, subunit 5, 16kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005708  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270439 NP_001257368    
NM_005717 NP_005708 O15511 P16-Arc

Related Sequences

 
mRNAGenPeptSwissProt
AF006088 AAB64193 O15511
AF017807 AAB70561 O15511
BC057237 AAH57237 O15511
BC071857 AAH71857 Q6IPM3
BC152789 AAI52790  
HQ447728 ADQ32213  
AK095424 BAG53053 B3KTE1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARPC5 NP_005708 R.norvegicus Arpc5 360854   NP_001020888 100
M.musculus Arpc5 67771 Gene Info NP_080645 99
D.melanogaster p16-ARC 33444   NP_608693 54
A.gambiae AgaP_AGAP008895 1279862   XP_319641 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)