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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTT, Huntingtin
Sequence ID:NM_002111
RefSeqGene ID:NG_009378
Entrez Gene ID:3064
Ensembl ID:ENSG00000197386

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HUNTINGTON DISEASE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 3076407 - 3245670

 Exon Info From UCSC:
NM_002111

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069606Full LengthBC172756huntingtin
4300144IncompleteBC014028huntingtin (Huntington disease)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002102  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002111 NP_002102   HEAT

Related Sequences

 
mRNAGenPeptSwissProt
L20431 AAA52702 P42858
L12392 AAB38240 P42858
BC172756 AAI72756  
AB016794 BAA36753 P42858
AB209506 BAD92743 Q59FF4
AK290544 BAF83233 A8K3C9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTT NP_002102 M.musculus Htt 15194 Gene Info NP_034544 91
R.norvegicus Htt 29424   NP_077333 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta