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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRCH3, Leucine-rich repeats and calponin homology (CH) domain containing 3
Sequence ID:NM_032773
Entrez Gene ID:84859
Ensembl ID:ENSG00000186001

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 197592318 - 197612702

 Exon Info From UCSC:
NM_032773

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2960711Full LengthBC007504leucine-rich repeats and calponin homology (CH) domain containing 3
4152627IncompleteBC010565leucine-rich repeats and calponin homology (CH) domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116162  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032773 NP_116162 Q96II8 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC007504 AAH07504 Q96II8
BC010565 AAH10565 Q96II8
DQ893268 ABM84194  
DQ896598 ABM87597  
AK055819 BAG51577 B3KP65
AK293745 BAG57168 B4DEQ7
AK300466 BAG62185 B4DU23
AK303521 BAG64549 B4E0T7
AL137527 CAB70791 Q96II8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRCH3 NP_116162 R.norvegicus Lrch3 303883   NP_001100558 89
M.musculus Lrch3 70144 Gene Info NP_001074724 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)