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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIGZ, Phosphatidylinositol glycan anchor biosynthesis, class Z
Sequence ID:NM_025163
Entrez Gene ID:80235
Ensembl ID:ENSG00000119227

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 196673227 - 196695704

NM_025163 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
222363196673214196675555
23642574196678691196678901
25752721196695557196695703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4871581Full LengthBC044640phosphatidylinositol glycan anchor biosynthesis, class Z

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079439  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025163 NP_079439 Q86VD9 Glyco_transf_22

Related Sequences

 
mRNAGenPeptSwissProt
BC044640 AAH44640 Q86VD9
AK022830 BAB14263 Q86VD9
AK296867 BAG59430 B4DL68

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIGZ NP_079439 M.musculus Pigz 239827 Gene Info NP_766410 80
R.norvegicus Pigzl1 303872   XP_002727945 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)