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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLCO2A1, solute carrier organic anion transporter family, member 2A1
Sequence ID:NM_005630
RefSeqGene ID:NG_031964
Entrez Gene ID:6578
Ensembl ID:ENSG00000174640

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 133661155 - 133748769

 Exon Info From UCSC:
NM_005630

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5751516Full LengthBC041140solute carrier organic anion transporter family, member 2A1
6481104Full LengthBC051347solute carrier organic anion transporter family, member 2A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005621  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005630 NP_005621 Q92959 OATP
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
U70867 AAC09469 Q92959
BC041140 AAH41140 Q92959
BC051347 AAH51347 Q92959
AK303550 BAH13984 B7Z8J8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLCO2A1 NP_005621 M.musculus Slco2a1 24059 Gene Info NP_201571 83
R.norvegicus Slco2a1 24546   NP_073158 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)