Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COPG1, coatomer protein complex, subunit gamma 1
Sequence ID:NM_016128
Entrez Gene ID:22820
Ensembl ID:ENSG00000181789

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 128968537 - 128996614

 Exon Info From UCSC:
NM_016128

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6046736Full LengthBC066650coatomer protein complex, subunit gamma
3903594IncompleteBC020498coatomer protein complex, subunit gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057212  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016128 NP_057212 Q9Y678 Adaptin_N

Related Sequences

 
mRNAGenPeptSwissProt
AF100756 AAD43020 Q9Y678
BC020498 AAH20498 Q8WUI6
BC066650 AAH66650 Q9Y678
AB047846 BAB17657 Q9Y678
AK291693 BAF84382 Q9Y678
AK001724 BAG50968 Q9Y678
AK123939 BAG53983 B3KW21

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COPG1 NP_057212 M.musculus Copg 54161 Gene Info NP_059505 97
R.norvegicus Copg 297428   NP_001026992 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)