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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SEC61A1, Sec61 alpha 1 subunit (S. cerevisiae)
Sequence ID:NM_013336
Entrez Gene ID:29927
Ensembl ID:ENSG00000058262

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 127771305 - 127790526

 Exon Info From UCSC:
NM_013336

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062204Full LengthBC156688Sec61 alpha 1 subunit (S. cerevisiae)
100016193BC152927Sec61 alpha 1 subunit (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013336 NP_037468 P61619  

Related Sequences

 
mRNAGenPeptSwissProt
AF077032 AAD27765 P61619
AF084458 AAD39847 P61619
BC152927 AAI52928  
BC156688 AAI56689  
AF346602 AAK29083 P61619
AK074907 BAC11283 P61619
AK074928 BAC11298 P61619
AK075148 BAC11434 P61619
AK001689 BAG50960 B3KME8
AK027423 BAG51318 B3KNF6
AK027452 BAG51323 B3KME8
AK027454 BAG51324 B3KNG2
AK027458 BAG51326 B3KNG2
AK074706 BAG51989 B3KNF6
AK299118 BAG61173 B4DR61
AL831940 CAD38592 P61619
AL832821 CAI46127 P61619

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEC61A1 NP_037468 M.musculus Sec61a1 53421 Gene Info NP_058602 100
R.norvegicus Sec61a1 80843   NP_954865 100
A.thaliana AT2G34250 817986   NP_180972 69
A.thaliana AT1G29310 839805   NP_174225 69
P.falciparum Sec61 813790   XP_001350175 67
N.crassa NCU08897 3874982   XP_958835 65
S.pombe sec61 2541037   NP_595226 59
S.cerevisiae SEC61 851095   NP_013482 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta