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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TCTA, T-cell leukemia translocation altered
Sequence ID:NM_022171
Entrez Gene ID:6988
Ensembl ID:ENSG00000145022

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 49449825 - 49453905

NM_022171 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14354944963849450072
4364904945048849450542
49121464945225249453907

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2959904Full LengthBC005157T-cell leukemia translocation altered gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022171 NP_071503 P57738  

Related Sequences

 
mRNAGenPeptSwissProt
L41143 AAA97514 P57738
BC005157 AAH05157 P57738
HQ447336 ADQ31822  
AK311839 BAG34781 P57738
CR457411 CAG33692 P57738

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TCTA NP_071503 R.norvegicus Tcta 306587   NP_001014027 95
M.musculus Tcta 102791 Gene Info NP_598747 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)