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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MAP4, microtubule-associated protein 4
Sequence ID:NM_001134364
NM_002375
NM_030885
NM_001134365
NM_030884
Entrez Gene ID:4134
Ensembl ID:ENSG00000047849

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 47892185 - 48130329

 Exon Info From UCSC:
NM_001134364
NM_002375
NM_030885
NM_001134365
NM_030884

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961360Full LengthBC008715microtubule-associated protein 4
2961360Full LengthBC015149microtubule-associated protein 4
4098499Full LengthBC012794microtubule-associated protein 4
3688177IncompleteBC048200microtubule-associated protein 4
4096931IncompleteBC019229microtubule-associated protein 4
4723117IncompleteBC067228microtubule-associated protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002366  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134364 NP_001127836    
NM_002375 NP_002366 P27816 Tubulin-binding
NM_030885 NP_112147    

Related Sequences

 
mRNAGenPeptSwissProt
M64571 AAA59553 P27816
U19727 AAA67361 P27816
BC008715 AAH08715 P27816
BC012794 AAH12794 P27816
BC015149 AAH15149 P27816
BC019229 AAH19229 Q05D06
BC048200 AAH48200 Q86Y04
BC051843 AAH51843 P27816
BC067228 AAH67228 Q6NX68
AF454938 AAP97697 Q7Z4R3
EU831693 ACE86527  
EU831606 ACE87206  
AK054696 BAB70795 P27816
AK125245 BAC86099 P27816
AB209377 BAD92614 P27816
AK297242 BAG59722 B4DM10
AK299854 BAG61713 B4DSQ1
AL831878 CAD38562 Q8NDS5
CR749544 CAH18346 P27816

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAP4 NP_002366 M.musculus Mtap4 17758 Gene Info NP_032659 65
R.norvegicus Map4 367171   NP_001019449 62
C.elegans ptl-1 175230   NP_001022578 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)