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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SATB1, SATB homeobox 1
Sequence ID:NM_001131010
NM_001195470
NM_002971
RefSeqGene ID:NG_027814
Entrez Gene ID:6304
Ensembl ID:ENSG00000182568

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 18390239 - 18466065

 Exon Info From UCSC:
NM_001131010
NM_002971

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3533915Full LengthBC001744SATB homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002962  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001131010 NP_001124482    
NM_001195470 NP_001182399    
NM_002971 NP_002962 Q01826 Homeobox
CUT

Related Sequences

 
mRNAGenPeptSwissProt
M97287 AAA60304 Q01826
BC001744 AAH01744 Q01826
DQ891870 ABM82796  
DQ895058 ABM85984  
AB209761 BAD92998 Q01826
AK127242 BAG54463 Q01826

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SATB1 NP_002962 M.musculus Satb1 20230 Gene Info NP_001157102 98
R.norvegicus Satb1 316164   NP_001012129 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)