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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C22orf23, chromosome 22 open reading frame 23
Sequence ID:NM_001207062
NM_032561
Entrez Gene ID:84645
Ensembl ID:ENSG00000128346

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 38339532 - 38349165

Transcript StartTranscript EndChromosomal Start Chromosomal End
17213833953238340252
7228223834042338340523
8239543834104838341179
95511373834328738343469
113812003834746638347528
120113123834905338349164
131315603834935538349602

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4755328Full LengthBC031998chromosome 22 open reading frame 23

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115950  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001207062 NP_001193991    
NM_032561 NP_115950 Q9BZE7 UPF0193

Related Sequences

 
mRNAGenPeptSwissProt
BC031998 AAH31998 Q9BZE7
AF324466 AAK07640 Q9BZE7
AK057349 BAB71442 Q9BZE7
CR456440 CAG30326 Q9BZE7
CU013038 CAK54469  
CU013326 CAK54768  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C22orf23 NP_115950 M.musculus 1700088E04Rik 27660 Gene Info NP_613047 81
R.norvegicus RGD1359634 315126   NP_001007709 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)