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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DGCR2, DiGeorge syndrome critical region gene 2
Sequence ID:NM_001173533
NM_001173534
NM_001184781
NM_005137
NR_033674
RefSeqGene ID:NG_021333
Entrez Gene ID:9993
Ensembl ID:ENSG00000070413

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 19025978 - 19109925

 Exon Info From UCSC:
NM_001173533
NM_001173534
NM_001184781
NM_005137

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5243412Full LengthBC032430DiGeorge syndrome critical region gene 2
5272271Full LengthBC040500DiGeorge syndrome critical region gene 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005128  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001173533 NP_001167004    
NM_001173534 NP_001167005    
NM_001184781 NP_001171710    
NM_005137 NP_005128 P98153 Ldl_recept_a

Related Sequences

 
mRNAGenPeptSwissProt
L46352 AAB59561 P98153
BC032430 AAH32430 P98153
BC040500 AAH40500 Q8IWC8
DQ894160 ABM85086  
FJ032369 ACI00235 B5TY34
D79985 BAA11480 P98153
AK291670 BAF84359 P98153
AK295697 BAH12160 B7Z3C4
AK296337 BAH12321 B7Z3T5
AK303130 BAH13903 B7Z8B7
AK304382 BAH14171 P98153
X83545 CAA58536 P98153
X84076 CAA58883 P98153
CR456433 CAG30319 P98153
CR936871 CAI59783 Q5CZ70
CU012993 CAK54424  
CU013281 CAK54723  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DGCR2 NP_005128 M.musculus Dgcr2 13356 Gene Info NP_034178 93
R.norvegicus Dgcr2 360742   NP_001012146 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)