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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP6V1E1, ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
Sequence ID:NM_001039366
NM_001039367
NM_001696
RefSeqGene ID:NG_009214
Entrez Gene ID:529
Ensembl ID:ENSG00000131100

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 18075174 - 18111515

 Exon Info From UCSC:
NM_001039366
NM_001039367
NM_001696

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820930Full LengthBC004443ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001687  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039366 NP_001034455    
NM_001039367 NP_001034456    
NM_001696 NP_001687 Q53Y06
P36543
vATP-synt_E

Related Sequences

 
mRNAGenPeptSwissProt
BC004443 AAH04443 Q53Y06
P36543
BT007128 AAP35792 Q53Y06
P36543
EU831565 ACE86484  
EU831478 ACE87165  
AK312394 BAG35311 Q53Y06
AK294623 BAG57804 P36543
AK315941 BAH14312 A8MUN4
X71491 CAA50592 P36543
X76228 CAA53814 Q53Y06
P36543
CR456385 CAG30271 Q53Y06
P36543
CU012943 CAK54374  
CU013231 CAK54673  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V1E1 NP_001687 M.musculus Atp6v1e1 11973 Gene Info NP_031536 99
R.norvegicus Atp6v1e1 297566   NP_942040 99
A.gambiae AgaP_AGAP002401 1273561   XP_312551 63
D.melanogaster Vha26 40679   NP_730957 63
C.elegans vha-8 177442   NP_501040 58
N.crassa NCU07446 3880773   XP_964633 41
P.falciparum PFI1670c 813614   XP_001352210 40
A.thaliana VHA-E2 820003   NP_187468 39
S.pombe vma4 2543000   NP_594932 37
S.cerevisiae VMA4 854509   NP_014977 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)