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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LCA5L, Leber congenital amaurosis 5-like
Sequence ID:NM_152505
Entrez Gene ID:150082
Ensembl ID:ENSG00000157578

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 40793484 - 40801072

NM_152505 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
37694077777140778537
7708874078190440782021
8889914078218940782292
99210764078364340783727
107712144079263140792768
121517294079490140795415
173020614080009740800428
206221424080105640801136
214322964080734540807498
229723644081606040816127

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5271223Full LengthBC031059Leber congenital amaurosis 5-like
5297703Full LengthBC043006Leber congenital amaurosis 5-like

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152505 NP_689718 O95447  

Related Sequences

 
mRNAGenPeptSwissProt
BC031059 AAH31059 O95447
BC043006 AAH43006 O95447

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LCA5L NP_689718 R.norvegicus Lca5l 498065   NP_001017484 72
M.musculus Lca5l 385668 Gene Info NP_001001492 65