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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SON, SON DNA binding protein
Sequence ID:NM_138927
NM_032195
Entrez Gene ID:6651
Ensembl ID:ENSG00000159140

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 34915374 - 34932967

 Exon Info From UCSC:
NM_138927
NM_032195

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3161999IncompleteBC002422SON DNA binding protein
3998051IncompleteBC005337SON DNA binding protein
4075982IncompleteBC029455SON DNA binding protein
4793409IncompleteBC066303SON DNA binding protein
5185870IncompleteBC054029SON DNA binding protein
6739312IncompleteBC104656SON DNA binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620305  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032195 NP_115571    
NM_138927 NP_620305 P18583 dsrm
G-patch

Related Sequences

 
mRNAGenPeptSwissProt
AF139897 AAD50078 P18583
AF161428 AAF28988 P18583
AF161430 AAF28990 P18583
BC002422 AAH02422 P18583
BC005337 AAH05337 A0JLP4
BC029455 AAH29455 Q3SWV4
BC104656 AAI04657 Q3SWV4
AY026895 AAK07692 P18583
AF435977 AAL30810 P18583
AF380179 AAL34497 P18583
AF380180 AAL34498 P18583
AF380181 AAL34499 P18583
AF380182 AAL34500 P18583
AF380183 AAL34501 P18583
AF380184 AAL34502 P18583
AB028942 BAA82971 P18583
AK024752 BAB14985 P18583
AK127947 BAC87202 Q6ZRV7
AK091233 BAG52313 B3KRA1
X63071 CAA44793 P18583
X63753 CAA45282 P18583
X63751 CAC69885 P18583

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SON NP_620305 R.norvegicus Son 304092   NP_001163798 88
M.musculus Son 20658 Gene Info NP_849211 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)