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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PEX19, peroxisomal biogenesis factor 19
Sequence ID:NM_001193644
NM_002857
NR_036492
NR_036493
NM_001131039
RefSeqGene ID:NG_008637
Entrez Gene ID:5824
Ensembl ID:ENSG00000162735

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
PEROXISOME BIOGENESIS DISORDER 12A (ZELLWEGER) 
PEROXISOME BIOGENESIS DISORDER 1A (ZELLWEGER)PEX1
PEX10
PEX12
PEX13
PEX14
PEX2
PEX26
PEX26
PEX3
PEX3
PEX5
PEX6

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 160249220 - 160254918

 Exon Info From UCSC:
NM_001193644
NM_002857
NM_001131039

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820701Full LengthBC000496peroxisomal biogenesis factor 19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002848  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193644 NP_001180573    
NM_002857 NP_002848 P40855 Pex19

Related Sequences

 
mRNAGenPeptSwissProt
BC000496 AAH00496 P40855
BT006879 AAP35525 P40855
DQ891417 ABM82343  
DQ894591 ABM85517  
AB018541 BAA76291 P40855
AB062286 BAB93469 P40855
AK300368 BAH13271 B7Z6I5
AK303099 BAH13899 B7Z8B3
X75535 CAA53225 P40855

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PEX19 NP_002848 R.norvegicus LOC100360976 100360976   XP_002728104 93
R.norvegicus Pex19 289233   NP_001100845 93
M.musculus Pex19 19298 Gene Info NP_075528 91
C.elegans prx-19 176239   NP_498947 36
A.gambiae AgaP_AGAP008804 4577982   XP_001237621 34
A.thaliana PEX19-2 831621   NP_568351 34
D.melanogaster CG5325 34630   NP_609547 32
A.thaliana PEX19-1 821248   NP_186999 31
N.crassa NCU04301 3877213   XP_961091 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)