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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLPI, secretory leukocyte peptidase inhibitor
Sequence ID:NM_003064
RefSeqGene ID:NG_028137
Entrez Gene ID:6590
Ensembl ID:ENSG00000124107

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 43881642 - 43883184

NM_003064 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11824388087843881059
1833324388164243881791
3334914388221543882373
4925984388309943883205

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4733996Full LengthBC020708secretory leukocyte peptidase inhibitor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003055  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003064 NP_003055 P03973 WAP

Related Sequences

 
mRNAGenPeptSwissProt
AF114471 AAD19661 P03973
BC020708 AAH20708 P03973
DQ891365 ABM82291  
DQ894545 ABM85471  
AK312192 BAG35125 P03973
X04470 CAA28158 P03973
X04503 CAA28188 P03973
AX772818 CAE06258  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLPI NP_003055 M.musculus Slpi 20568 Gene Info NP_035544 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta