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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXS1, forkhead box S1
Sequence ID:NM_004118
Entrez Gene ID:2307
Ensembl ID:ENSG00000179772

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 30432988 - 30433321

NM_004118 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3613533043210230433419

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3028182Full LengthBC013408forkhead box S1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004109  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004118 NP_004109 O43638 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
AF042831 AAC15420 O43638
BC013408 AAH13408 O43638
BT009768 AAP88770 O43638
DQ896105 ABM87104  
EU176391 ABW03842  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXS1 NP_004109 R.norvegicus Foxs1 311547   NP_001012091 78
M.musculus Foxs1 14239 Gene Info NP_034356 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)