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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NXT1, NTF2-like export factor 1
Sequence ID:NM_013248
Entrez Gene ID:29107
Ensembl ID:ENSG00000132661

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p12-p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 23331489 - 23335372

NM_013248 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13262333137223331697
32711172333461723335407

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820775Full LengthBC000759NTF2-like export factor 1
2820775Full LengthBC003029NTF2-like export factor 1
3450767Full LengthBC003410NTF2-like export factor 1
3608037Full LengthBC002687NTF2-like export factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037380  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013248 NP_037380 Q9UKK6 NTF2

Related Sequences

 
mRNAGenPeptSwissProt
AF156957 AAD54942 Q9UKK6
BC000759 AAH00759 Q9UKK6
BC002687 AAH02687 Q9UKK6
BC003029 AAH03029 Q9UKK6
BC003410 AAH03410 Q9UKK6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NXT1 NP_037380 M.musculus Nxt1 56488 Gene Info NP_062735 99
R.norvegicus Nxt1 296219   NP_001099991 98
A.gambiae AgaP_AGAP008234 1277746   XP_317236 47
D.melanogaster Nxt1 37769   NP_611833 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)