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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC23A2, Solute carrier family 23 (nucleobase transporters), member 2
Sequence ID:NM_203327
NM_005116
RefSeqGene ID:NG_029959
Entrez Gene ID:9962
Ensembl ID:ENSG00000089057

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 4833003 - 4834816

 Exon Info From UCSC:
NM_203327
NM_005116

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3923057Full LengthBC013112solute carrier family 23 (nucleobase transporters), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_976072  NP_005107  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005116 NP_005107 Q9UGH3 Xan_ur_permease
NM_203327 NP_976072 Q9UGH3 Xan_ur_permease

Related Sequences

 
mRNAGenPeptSwissProt
AF058319 AAC78806 Q9UGH3
AF092511 AAD11783 Q9UGH3
AF164142 AAF80493 Q9UGH3
BC013112 AAH13112 Q9UGH3
AY380556 AAQ79775 Q9UGH3
DQ011866 AAY26157 Q4ZGM1
EF032501 ABK34450 A0MSJ5
D87075 BAA13244 Q9UGH3
AK296304 BAG59003 B4DJZ1
AK297253 BAG59732 B4DM20
AJ269478 CAB58120 Q9UGH3
AJ292318 CAC83100 Q9UGH3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC23A2 NP_976072 R.norvegicus Slc23a2 50622   NP_059012 96
M.musculus Slc23a2 54338 Gene Info NP_061294 95
A.thaliana AT4G38050 829961   NP_195518 37
A.thaliana NAT12 817328   NP_850108 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta