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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. EFNA1, ephrin-A1
Sequence ID:NM_004428
Entrez Gene ID:1942
Ensembl ID:ENSG00000169242

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 155099935 - 155107332

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5402648Full LengthBC032698ephrin-A1
30376031Full LengthBC095432ephrin-A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_872626  NP_004419  

Protein Infomation

NM_004428 NP_004419 P20827 Ephrin
NM_182685 NP_872626   Ephrin

Related Sequences

M57730 AAA58388 P20827
BC032698 AAH32698 P20827
BC095432 AAH95432 P20827
DQ890722 ABM81648  
DQ893900 ABM84826  
AK289589 BAF82278 A8K0M4
AK313117 BAG35938 B2R7U1
CR457416 CAG33697 P20827

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens EFNA1 NP_004419 R.norvegicus Efna1 94268   NP_446051 87
M.musculus Efna1 13636 Gene Info NP_034237 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)