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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AGPS, Alkylglycerone phosphate synthase
Sequence ID:NM_003659
RefSeqGene ID:NG_008968
Entrez Gene ID:8540
Ensembl ID:ENSG00000018510

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 178257768 - 178402971

 Exon Info From UCSC:
NM_003659

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40148148Full LengthBC141820alkylglycerone phosphate synthase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003650  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003659 NP_003650 O00116 EC 2.5.1.26 FAD_binding_4
FAD-oxidase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC141820 AAI41821 O00116 EC 2.5.1.26
AY544121 AAT11152 O00116 EC 2.5.1.26
AK314259 BAG36924 O00116 EC 2.5.1.26
AK296239 BAH12290 B7Z3Q4  
AK316240 BAH14611 B7ZAC5  
Y09443 CAA70591 O00116 EC 2.5.1.26

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGPS NP_003650 M.musculus Agps 228061 Gene Info NP_766254 92
C.elegans ads-1 175192   NP_497185 54
A.gambiae AgaP_AGAP004358 1274507   XP_313642 53
D.melanogaster CG10253 36669   NP_611006 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)