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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. INTS3, integrator complex subunit 3
Sequence ID:NM_023015
Entrez Gene ID:65123
Ensembl ID:ENSG00000143624

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 153744846 - 153746555

 Exon Info From UCSC:
NM_023015

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5752962Full LengthBC116458integrator complex subunit 3
8144095Full LengthBC105092integrator complex subunit 3
8144097Full LengthBC105094integrator complex subunit 3
3936764IncompleteBC098431integrator complex subunit 3
6514555IncompleteBC073985integrator complex subunit 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023015 NP_075391    

Related Sequences

 
mRNAGenPeptSwissProt
AF130066 AAG35494 Q9H3A6
BC025254 AAH25254 Q68E01
BC054513 AAH54513 Q68E01
BC073985 AAH73985 Q68E01
BC098431 AAH98431 Q68E01
BC105092 AAI05093 Q68E01
BC105094 AAI05095 Q68E01
BC116458 AAI16459 Q68E01
AK025572 BAB15174 Q68E01
AK074979 BAC11329 Q68E01
AK290025 BAF82714 Q68E01
AK298746 BAG60890 Q68E01
AK304874 BAG65611 Q68E01
BX640786 CAE45876 Q68E01
BX640950 CAE45974 Q68E01
CR627233 CAH10366 Q68E01
AL832133 CAH10398 Q68E01
CR749212 CAH18069 Q68E01
CR749376 CAH18229 Q68E01

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens INTS3 NP_075391 M.musculus Ints3 229543 Gene Info NP_849207 99
R.norvegicus Ints3 361988   XP_342289 99
A.gambiae INT3_ANOGA 1273424   XP_312400 43
D.melanogaster CG17665 3355010   NP_001036437 41
A.thaliana emb2739 827107   NP_193195 35
C.elegans Y92H12A.4 3565441   NP_490863 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)