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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHST10, carbohydrate sulfotransferase 10
Sequence ID:NM_004854
RefSeqGene ID:NG_028153
Entrez Gene ID:9486
Ensembl ID:ENSG00000115526

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 101008327 - 101034118

NM_004854 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
21923101008322101010243
19242029101011970101012075
20302264101014369101014603
22652356101019025101019116
23572488101023037101023168
24892559101031502101031572
25602815101033835101034090

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4158309Full LengthBC010441carbohydrate sulfotransferase 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004845  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004854 NP_004845 O43529 Sulfotransfer_2

Related Sequences

 
mRNAGenPeptSwissProt
AF033827 AAC04707 O43529
AF070594 AAC28651 O43529
BC010441 AAH10441 O43529
DQ891064 ABM81990  
DQ894245 ABM85171  
AK313241 BAG36052 O43529
AK297267 BAH12534 B7Z4E8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHST10 NP_004845 M.musculus Chst10 98388 Gene Info NP_660124 91
R.norvegicus Chst10 140568   NP_536322 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)