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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SEMA4C, sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
Sequence ID:NM_017789
Entrez Gene ID:54910
Ensembl ID:ENSG00000168758

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 97525486 - 97529704

 Exon Info From UCSC:
NM_017789

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40035252Full LengthBC109103sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
40035253Full LengthBC109104sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
3528227IncompleteBC017476sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
4561275IncompleteBC062984sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017789 NP_060259 Q9C0C4  

Related Sequences

 
mRNAGenPeptSwissProt
AF258577 AAG23780 Q8WY71
BC017476 AAH17476 Q9C0C4
BC062984 AAH62984 Q6P5A5
BC109103 AAI09104 Q9C0C4
BC109104 AAI09105 Q9C0C4
AF370374 AAQ15210 Q71RG3
AY358842 AAQ89201 Q9C0C4
AK000376 BAA91124 Q9NX92
AB051526 BAB21830 Q9C0C4
AK075388 BAC11588 Q8NBN9
AK126512 BAG54340 Q8NBN9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEMA4C NP_060259 M.musculus Sema4c 20353 Gene Info NP_001119519 88
R.norvegicus Sema4c 301346   NP_001100372 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)